[ Bron: libgkarrays ]
Pakket: libgkarrays1 (2.1.0+dfsg-4)
Verwijzigingen voor libgkarrays1
Debian bronnen:
Het bronpakket libgkarrays downloaden:
- [libgkarrays_2.1.0+dfsg-4.dsc]
- [libgkarrays_2.1.0+dfsg.orig.tar.xz]
- [libgkarrays_2.1.0+dfsg-4.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [crac.gforge.inria.fr]
Vergelijkbare pakketten:
library to query large collection of NGS sequences
Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).
Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).
Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.
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