[ Bron: gmap ]
Pakket: gmap (2021-12-17+ds-3)
Verwijzigingen voor gmap
Debian bronnen:
Het bronpakket gmap downloaden:
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Shaun Jackman (QA-pagina)
- Andreas Tille (QA-pagina)
- Alexandre Mestiashvili (QA-pagina)
- Étienne Mollier (QA-pagina)
Externe bronnen:
- Homepage [research-pub.gene.com]
Vergelijkbare pakketten:
spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as utilities to manage genome databases in GMAP/GSNAP format. GMAP (Genomic Mapping and Alignment Program) is a tool for aligning EST, mRNA and cDNA sequences. GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for aligning single-end and paired-end transcriptome reads. Both tools can use a database of
* known splice sites and identify novel splice sites. * known single-nucleotide polymorphisms (SNPs).GSNAP can align bisulfite-treated DNA.
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