Package: libbio-db-hts-perl (3.01-5) [debports]

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Perl interface to the HTS library

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension 'csi' (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

This package provides a Perl interface to the HTS library.

Other Packages Related to libbio-db-hts-perl

• dep: libbio-perl-perl

  BioPerl core perl modules

• dep: libc6 (>= 2.16)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: perl (>= 5.40.0-6)

  래리 월의 Practical Extraction and Report Language

• dep: perlapi-5.40.0

  virtual package provided by perl-base

• dep: zlib1g (>= 1:1.2.3.3)

  압축 라이브러리 - 런타임

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