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[ Source: squizz  ]

Package: squizz (0.99d+dfsg-3 and others)

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Converter for genetic sequences and alignments

Squizz is a sequence/alignment format checker, but it has some conversion capabilities too. Most common sequence and alignment formats are supported :

 - EMBL, FASTA, GCG, GDE, GENBANK, IG, NBRF, PIR (codata), RAW, and
  SWISSPROT.
 - CLUSTAL, FASTA, MEGA, MSF, NEXUS, PHYLIP (interleaved and sequential) and
  STOCKHOLM.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: Data Conversion

Other Packages Related to squizz

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  • suggests
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Download squizz

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.99d+dfsg-3 31.2 kB61.0 kB [list of files]
amd64 0.99d+dfsg-3 31.1 kB60.0 kB [list of files]
arm64 0.99d+dfsg-3+b1 30.9 kB109.0 kB [list of files]
armel 0.99d+dfsg-3 30.6 kB56.0 kB [list of files]
armhf 0.99d+dfsg-3 30.5 kB52.0 kB [list of files]
hppa (unofficial port) 0.99d+dfsg-3 31.4 kB57.0 kB [list of files]
i386 0.99d+dfsg-3 31.5 kB60.0 kB [list of files]
ia64 (unofficial port) 0.99d+dfsg-3 32.6 kB64.0 kB [list of files]
m68k (unofficial port) 0.99d+dfsg-3 30.8 kB60.0 kB [list of files]
mips64el 0.99d+dfsg-3 31.3 kB62.0 kB [list of files]
ppc64 (unofficial port) 0.99d+dfsg-3 31.7 kB109.0 kB [list of files]
ppc64el 0.99d+dfsg-3 31.7 kB109.0 kB [list of files]
riscv64 0.99d+dfsg-3+b1 30.9 kB57.0 kB [list of files]
s390x 0.99d+dfsg-3 30.8 kB56.0 kB [list of files]
sh4 (unofficial port) 0.99d+dfsg-3 31.2 kB56.0 kB [list of files]
sparc64 (unofficial port) 0.99d+dfsg-3 30.7 kB61.0 kB [list of files]
x32 (unofficial port) 0.99d+dfsg-3 31.0 kB60.0 kB [list of files]