Package: libfastahack0 (1.0.0+dfsg-11 and others) [debports]

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library for indexing and sequence extraction from FASTA files (lib)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This package contains the dynamic library.

Other Packages Related to libfastahack0

• dep: libc6 (>= 2.38)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.4)

  GCC 기능 지원 라이브러리

• dep: libstdc++6 (>= 13.1)

  GNU 표준 C++ 라이브러리 v3

Download libfastahack0

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
sparc64 (unofficial port)	1.0.0+dfsg-11+b1	21.5 kB	1,051.0 kB	[list of files]