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[ Source: proftmb  ]

Package: proftmb (1.1.12-11 and others)

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per-residue prediction of bacterial transmembrane beta barrels

proftmb predicts transmembrane beta-barrel (TMB) proteins in Gram-negative bacteria.

For each query protein, proftmb provides both a Z-value indicating that the protein actually contains a membrane barrel, and a four-state per-residue labeling of upward- and downward-facing strands, periplasmic hairpins and extracellular loops.

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Download proftmb

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.1.12-11+b1 335.5 kB1,758.0 kB [list of files]
amd64 1.1.12-11+b1 354.7 kB1,709.0 kB [list of files]
arm64 1.1.12-11+b1 331.3 kB1,693.0 kB [list of files]
armel 1.1.12-11+b1 321.2 kB1,628.0 kB [list of files]
armhf 1.1.12-11+b1 323.5 kB1,512.0 kB [list of files]
hppa (unofficial port) 1.1.12-11+b1 335.7 kB1,639.0 kB [list of files]
i386 1.1.12-11+b1 361.7 kB1,744.0 kB [list of files]
ia64 (unofficial port) 1.1.12-11 377.6 kB2,106.0 kB [list of files]
m68k (unofficial port) 1.1.12-11+b1 332.3 kB1,652.0 kB [list of files]
mips64el 1.1.12-11+b1 334.2 kB1,780.0 kB [list of files]
ppc64 (unofficial port) 1.1.12-11+b1 352.2 kB1,821.0 kB [list of files]
ppc64el 1.1.12-11+b1 355.3 kB1,821.0 kB [list of files]
riscv64 1.1.12-11+b2 348.3 kB1,569.0 kB [list of files]
s390x 1.1.12-11+b1 357.4 kB1,725.0 kB [list of files]
sh4 (unofficial port) 1.1.12-11+b1 374.2 kB1,693.0 kB [list of files]
sparc64 (unofficial port) 1.1.12-11+b1 325.3 kB2,273.0 kB [list of files]
x32 (unofficial port) 1.1.12-11+b1 354.9 kB1,676.0 kB [list of files]