Package: porechop (0.2.4+dfsg-8) [debports]

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Experimental package

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

adapter trimmer for Oxford Nanopore reads

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.

Other Packages Related to porechop

• dep: libc6 (>= 2.4)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC 기능 지원 라이브러리

• dep: libstdc++6 (>= 13.1)

  GNU 표준 C++ 라이브러리 v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (>= 3~)

Download porechop

Download for all available architectures

Architecture	Package Size	Installed Size	Files
sparc64 (unofficial port)	51.3 kB	1,187.0 kB	[list of files]