Package: probcons (1.12-12)

[ Source: probcons  ]

PROBabilistic CONSistency-based multiple sequence alignment

Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to probcons

• dep: libc6 (>= 2.27)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libgcc1 (>= 1:3.5)

  GCC 기능 지원 라이브러리

• dep: libstdc++6 (>= 5.2)

  GNU 표준 C++ 라이브러리 v3

• sug: probcons-extra

  Extra programs from the probcons package

• enh: t-coffee

  Multiple Sequence Alignment

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armhf	93.9 kB	237.0 kB	[list of files]