Package: samblaster (0.1.26-1)

[ Source: samblaster  ]

marks duplicates, extracts discordant/split reads

Current "next-generation" sequencing technologies cannot tell what exact sequence they will be reading. They take what is available. And if some sequences are read very often, then this needs some extra biomedical thinking. The genome could for instance be duplicated.

samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.

Other Packages Related to samblaster

• dep: libc6 (>= 2.4)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libstdc++6 (>= 5)

  GNU 표준 C++ 라이브러리 v3

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Architecture	Package Size	Installed Size	Files
s390x	23.6 kB	61.0 kB	[list of files]