Package: blixem (4.44.1+dfsg-6 and others)

[ Source: seqtools  ]

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Tags: Interface Toolkit: GTK

Other Packages Related to blixem

• dep: libc6 (>= 2.7)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libcairo2 (>= 1.2.4)

  카이로 2D 벡터 그래픽 라이브러리

• dep: libcurl4 (>= 7.16.2)

  사용하기 쉬운 클라이언트측 URL 전송 라이브러리 (OpenSSL 지원)

• dep: libgbtools0 (>= 4.44.1+dfsg)

  library for visualising sequence alignments

• dep: libgcc-s1 (>= 3.0)

  GCC 기능 지원 라이브러리

• dep: libglib2.0-0 (>= 2.35.9)

  C 루틴 GLib 라이브러리

• dep: libgtk2.0-0 (>= 2.14.0)

  GTK graphical user interface library - old version

• dep: libpango-1.0-0 (>= 1.14.0)

  국제화된 텍스트의 레이아웃 및 렌더링

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 공유 라이브러리

• dep: libstdc++6 (>= 5.2)

  GNU 표준 C++ 라이브러리 v3

Download blixem

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
s390x	4.44.1+dfsg-6+b1	1,321.3 kB	2,306.0 kB	[list of files]