Package: tvc (5.0.3+git20151221.80e144e+dfsg-3 and others)

[ Source: tvc  ]

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

Other Packages Related to tvc

• dep: libarmadillo10 (>= 1:10.1.2+dfsg)

  streamlined C++ linear algebra library

• dep: libbamtools2.5.1 (>= 2.5.1+dfsg)

  dynamic library for manipulating BAM (genome alignment) files

• dep: libc6 (>= 2.29)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libgcc-s1 (>= 3.0)

  GCC 기능 지원 라이브러리

• dep: libjsoncpp24 (>= 1.9.4)

  library for reading and writing JSON for C++

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 9)

  GNU 표준 C++ 라이브러리 v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: zlib1g (>= 1:1.1.4)

  압축 라이브러리 - 런타임

Download tvc

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
i386	5.0.3+git20151221.80e144e+dfsg-3+b2	1,082.4 kB	3,453.0 kB	[list of files]