[ ソース: scoary ]
パッケージ: scoary (1.6.16-9)
pangenome-wide association studies
Scoary is designed to take the gene_presence_absence.csv file from Roary as well as a traits file created by the user and calculate the associations between all genes in the accessory genome and the traits. It reports a list of genes sorted by strength of association per trait.
その他の scoary 関連パッケージ
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (>= 3.2)
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- dep: python3-scipy
- scientific tools for Python 3
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- sug: roary
- high speed stand alone pan genome pipeline