[ ソース: lefse ]
パッケージ: lefse (1.1.2-1)
determine features of organisms, clades, taxonomic units, genes
LEfSe (Linear discriminant analysis Effect Size) determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance.
その他の lefse 関連パッケージ
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biom-format
- Biological Observation Matrix (BIOM) format (Python 3)
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab
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- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
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- dep: python3-rpy2
- Python3 interface to the GNU R language and environment (version 2)
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- dep: r-cran-coin
- GNU R package providing conditional inference procedures