パッケージ: q2-fragment-insertion (2024.5.0-1)

[ ソース: q2-fragment-insertion  ]

QIIME 2 plugin for fragment insertion

QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. Key features:

 * Integrated and automatic tracking of data provenance
 * Semantic type system
 * Plugin system for extending microbiome analysis functionality
 * Support for multiple types of user interfaces (e.g. API, command line,

graphical)

QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline. QIIME 2 will address many of the limitations of QIIME 1, while retaining the features that makes QIIME 1 a powerful and widely-used analysis pipeline.

QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline. New functionality will regularly become available through QIIME 2 plugins. You can view a list of plugins that are currently available on the QIIME 2 plugin availability page. The future plugins page lists plugins that are being developed.

その他の q2-fragment-insertion 関連パッケージ

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biom-format

  Biological Observation Matrix (BIOM) format (Python 3)

• dep: python3-skbio

  Python3 data structures, algorithms, educational resources for bioinformatic

• dep: q2-types (>= 2024.5)

  QIIME 2 plugin defining types for microbiome analysis

• dep: qiime (>= 2024.5)

  Quantitative Insights Into Microbial Ecology

• rec: default-jdk

  Standard Java or Java compatible Development Kit

• rec: python3-ijson

  event-driven JSON parser (Python 3 version)

• rec: sepp

  phylogeny with ensembles of Hidden Markov Models

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アーキテクチャ	パッケージサイズ	インストールサイズ	ファイル
ppc64el	24.6 kB	142.0 kB	[ファイル一覧]