[ ソース: snakemake ]
パッケージ: snakemake (7.32.4-6)
snakemake に関するリンク
Debian の資源:
snakemake ソースパッケージをダウンロード:
メンテナ:
外部の資源:
- ホームページ [snakemake.readthedocs.io]
類似のパッケージ:
pythonic workflow management system
Build systems like GNU Make are frequently used to create complicated workflows, e.g. in bioinformatics. This project aims to reduce the complexity of creating workflows by providing a clean and modern domain specific language (DSL) in Python style, together with a fast and comfortable execution environment.
その他の snakemake 関連パッケージ
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- dep: libjs-jquery
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- dep: python3-git
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- dep: python3-humanfriendly
- Python3 library to make user friendly text interfaces
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- small but fast and easy to use stand-alone template engine
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- dep: python3-jsonschema
- An(other) implementation of JSON Schema
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- dep: python3-nbformat
- Jupyter notebook format (Python 3)
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- dep: python3-packaging
- core utilities for python3 packages
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- dep: python3-platformdirs
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- dep: python3-psutil
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- LP modeler - Python 3.x
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- dep: python3-ratelimiter
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- dep: python3-retry
- easy to use retry decorator
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- dep: python3-smart-open (>= 3.0~)
- utils for streaming large files
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- dep: python3-stopit
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- dep: python3-tabulate
- pretty-print tabular data in Python3
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- dep: python3-wrapt
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- dep: python3-yaml
- YAML parser and emitter for Python3
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- dep: python3-yte
- YAML template engine with Python expressions
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- rec: cwltool
- Common Workflow Language reference implementation
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- rec: imagemagick
- image manipulation programs -- binaries
以下のパッケージによって提供される仮想パッケージでもあります: graphicsmagick-imagemagick-compat, imagemagick-6.q16, imagemagick-7.q16
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- rec: python3-azure-storage
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- rec: python3-biopython
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- rec: python3-boto3
- Amazon ウェブサービスへの Python インターフェース - Python 3.x
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- rec: python3-botocore
- Low-level, data-driven core of boto 3 (Python 3)
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- rec: python3-dropbox
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- rec: python3-flask
- micro web framework based on Werkzeug and Jinja2 - Python 3.x
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- rec: python3-ftputil
- high-level FTP client library for Python
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- rec: python3-irodsclient
- Client API for iRods
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- rec: python3-kubernetes
- Kubernetes Python client - Python 3.x
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- rec: python3-pygments
- syntax highlighting package written in Python 3
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- rec: python3-tz
- Python3 version of the Olson timezone database
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- rec: python3-urllib3
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- rec: python3-yappi
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- sug: slurm-client
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- sug: snakemake-doc
- documentation for pythonic workflow management system