[ ソース: openms ]
パッケージ: topp (2.6.0+cleaned1-4 など)
topp に関するリンク
Debian の資源:
openms ソースパッケージをダウンロード:
- [openms_2.6.0+cleaned1-4.dsc]
- [openms_2.6.0+cleaned1.orig.tar.gz]
- [openms_2.6.0+cleaned1-4.debian.tar.xz]
メンテナ:
外部の資源:
- ホームページ [www.openms.de]
類似のパッケージ:
set of programs implementing The OpenMS Proteomic Pipeline
TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :
- TOPPView: A viewer for mass spectrometry data.
- TOPPAS: An assistant for GUI-driven TOPP workflow design.
- DTAExtractor: Extracts spectra of an MS run file to several
files in DTA format.
- FileConverter: Converts between different MS file formats.
- FileFilter: Extracts or manipulates portions of data from peak,
feature or consensus feature files.
- SpectraMerger: Merges spectra from an LC/MS map, either by
precursor or by RT blocks.
- BaselineFilter: Removes the baseline from profile spectra using a
top-hat filter.
- InternalCalibration: Applies an internal calibration.
- PTModel: Trains a model for the prediction of proteotypic
peptides from a training set.
- RTPredict: Predicts retention times for peptides using a model
trained by RTModel.
- ExecutePipeline: Executes workflows created by TOPPAS.
その他の topp 関連パッケージ
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- dep: libc6 (>= 2.38)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 共有ライブラリ
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) サポートライブラリ
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- dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b3)
- library for LC/MS data management and analysis - runtime
-
- dep: libqt5core5t64 (>= 5.15.1)
- Qt 5 コアモジュール
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- dep: libqt5gui5t64 (>= 5.11.3)
- Qt 5 GUI モジュール
- または libqt5gui5-gles (>= 5.11.3)
- Qt 5 GUI module — OpenGL ES variant
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- dep: libqt5widgets5t64 (>= 5.11.3)
- Qt 5 ウィジェットモジュール
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- dep: libstdc++6 (>= 14)
- GNU 標準 C++ ライブラリ v3
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- dep: libxerces-c3.2t64
- validating XML parser library for C++
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- dep: openms-common (= 2.6.0+cleaned1-4)
- package for LC/MS data management and analysis - shared data
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- sug: openms-doc
- package for LC/MS data management and analysis - documentation