パッケージ: megan-ce (6.21.1+dfsg-4)

[ ソース: megan-ce  ]

interactive tool to explore and analyse microbiome sequencing data

MEGAN Community Edition is a shotgun sequencer to analyze microbiome samples. It is a rewrite and extension of the widely-used microbiome analysis tool MEGAN so as to facilitate the interactive analysis of the taxonomic and functional content of very large microbiome datasets. Other new features include a functional classifier called InterPro2GO, gene-centric read assembly, principal coordinate analysis of taxonomy and function, and support for metadata. By integrating MEGAN CE with the high-throughput DNA-to-protein alignment tool DIAMOND a powerful and complete pipeline for the analysis of metagenome shotgun sequences can be provided.

その他の megan-ce 関連パッケージ

• dep: default-jre

  Standard Java or Java compatible Runtime

• dep: libcolt-free-java

  scalable scientific and technical computing in Java

• dep: libcommons-math3-java

  Java lightweight mathematics and statistics components

• dep: libgoogle-gson-java

  Converts Java objects into their JSON representation

• dep: libjama-java

  Basic linear algebra library for Java

• dep: libjbcrypt-java

  Java implementation of OpenBSD's Blowfish hashing

• dep: libjloda-java

  Java library of data structures and algorithms for bioinformatics

• dep: libopenjfx-java

  JavaFX/OpenJFX - Rich client application platform for Java (Java libraries)

• dep: libxerial-sqlite-jdbc-java

  Xerial's SQLite JDBC Driver

megan-ce のダウンロード

すべての利用可能アーキテクチャ向けのダウンロード

アーキテクチャ	パッケージサイズ	インストールサイズ	ファイル
all	36,208.3 kB	37,733.0 kB	[ファイル一覧]