パッケージ: jalview (2.11.2.5+dfsg-3)

[ ソース: jalview  ]

multiple alignment editor

JalView is a Java DNA, RNA and protein sequence alignment editor that can work with sequence alignments produced by programs implementing alignment algorithms such as clustalw, kalign and t-coffee.

It has lots of features, is actively developed, and will compare advantageously to BioEdit, while being free as in free speech!

その他の jalview 関連パッケージ

• dep: debconf

  Debian 設定管理システム

• dep: debconf (>= 0.5)

  Debian 設定管理システム

  または debconf-2.0

  以下のパッケージによって提供される仮想パッケージです: cdebconf, cdebconf-udeb, debconf

• dep: default-jre

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• dep: groovy

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• dep: javahelp2

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• dep: libandroid-json-org-java

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• dep: libapache-mime4j-java

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• dep: libaxis-java

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• dep: libbiojava6-java

  Java API to biological data and applications (version 6)

• dep: libcommons-discovery-java

  Locates classes that implement a given Java interface

• dep: libhtsjdk-java

  Java API for high-throughput sequencing data (HTS) formats

• dep: libhttpclient-java

  HTTP/1.1 compliant HTTP agent implementation

• dep: libhttpcore-java

  set of low level HTTP transport components for Java

• dep: libhttpmime-java

  HTTP/1.1 compliant HTTP agent implementation - MIME extension

• dep: libintervalstorej-java

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• dep: libjaba-client-java

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• dep: libjaxb-api-java

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• dep: libjaxb-java

  JAXB Reference Implementation

• dep: libjaxrs-api-java

  Java API for RESTful Services (JAX-RS)

• dep: libjaxws-java

  JAX-WS Reference Implementation (Library)

• dep: libjersey1-client-java

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• dep: libjersey1-core-java

  RESTful Web Services in Java (core library)

• dep: libjetty9-java

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• dep: libjfreesvg-java

  Java graphics library to generate content in SVG format

• dep: libjmol-java

  分子構造用 Java ライブラリ

• dep: libjson-simple-java

  Simple, lightweight and efficient JSON toolkit for Java

• dep: libjsoup-java

  Java HTML parser that makes sense of real-world HTML soup

• dep: libjswingreader-java

  RSS NewsFeed reader for Java

• dep: liblog4j1.2-java

  Logging library for java

• dep: liblog4j2-java

  Apache Log4j - Logging Framework for Java

• dep: libmiglayout-java

  Java Layout Manager

• dep: libslf4j-java

  Simple Logging Facade for Java

• dep: libvamsas-client-java

  library for phylogenetic tasks

• dep: varna

  Visualization Applet for RNA

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: kalign

  グローバルおよびプログレッシブ多重配列アライメント

• sug: t-coffee

  Multiple Sequence Alignment

jalview のダウンロード

すべての利用可能アーキテクチャ向けのダウンロード

アーキテクチャ	パッケージサイズ	インストールサイズ	ファイル
all	7,589.0 kB	8,100.0 kB	[ファイル一覧]