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[ Source: htscodecs  ]

Package: libhtscodecs2 (1.6.1-1)

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Custom compression for CRAM and others

This library implements the custom CRAM codecs used for "EXTERNAL" block types. These consist of two variants of the rANS codec (8-bit and 16-bit renormalisation, with run-length encoding and bit-packing also supported in the latter), a dynamic arithmetic coder, and custom codecs for name/ID compression and quality score compression derived from fqzcomp.

They come with small command line test tools to act as both compression exploration programs and as part of the test harness.

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Architecture Package Size Installed Size Files
amd64 93.4 kB236.0 kB [list of files]
arm64 72.9 kB212.0 kB [list of files]
armel 62.3 kB152.0 kB [list of files]
armhf 61.6 kB112.0 kB [list of files]
i386 69.2 kB168.0 kB [list of files]
mips64el 70.2 kB215.0 kB [list of files]
ppc64el 77.4 kB212.0 kB [list of files]
riscv64 72.8 kB128.0 kB [list of files]
s390x 82.9 kB188.0 kB [list of files]