Package: mecat2 (0.0+git20200428.f54c542+ds-4)

[ Source: mecat2  ]

ultra-fast and accurate de novo assembly tools for SMRT reads

An improved version of MECAT. It is an ultra-fast and accurate mapping and error correcting de novo assembly tools for single molecula sequencing (SMRT) reads. MECAT2 consists of the following three modules:

 1. mecat2map: a fast and accurate alignment tool for SMRT reads.
 2. mecat2cns: correct noisy reads based on their pairwise overlaps.
 3. fsa: a string graph based assembly tool.

Other Packages Related to mecat2

• dep: libc6 (>= 2.34)

  Libreria C GNU: librerie condivise
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  libreria di supporto a GCC

• dep: libgomp1 (>= 4.9)

  libreria di supporto GOMP (GCC OpenMP)

• dep: libstdc++6 (>= 13.1)

  libreria GNU Standard C++, versione 3

• dep: perl

  "Practical Extraction and Report Language" di Larry Wall

• dep: zlib1g (>= 1:1.1.4)

  libreria di compressione - runtime

Download mecat2

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Architecture	Package Size	Installed Size	Files
amd64	745.5 kB	4,052.0 kB	[list of files]
x32 (unofficial port)	717.5 kB	3,704.0 kB	[list of files]