[ Source: skewer ]
Package: skewer (0.2.2-2)
Links for skewer
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Download Source Package skewer:
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External Resources:
- Homepage [github.com]
Similar packages:
post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.
Features
* Detection and removal of adapter sequences * Insertion and deletion allowed in pattern matching * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads * Demultiplexing of barcoded sequencing runs * Multi-threading support * Trimming based on phred quality scores * IUPAC characters for barcodes and adapters * Compressed input and output support
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Download skewer
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
mips64el | 63.4 kB | 212.0 kB | [list of files] |