Package: ncbi-entrez-direct (14.6.20210224+dfsg-4 and others)

[ Source: ncbi-entrez-direct  ]

NCBI Entrez utilities on the command line

Entrez Direct (EDirect) is an advanced method for accessing NCBI's set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a terminal window or script. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.

EDirect also provides an argument-driven function that simplifies the extraction of data from document summaries or other results that are returned in structured XML format. This can eliminate the need for writing custom software to answer ad hoc questions. Queries can move seamlessly between EDirect commands and UNIX utilities or scripts to perform actions that cannot be accomplished entirely within Entrez.

Other Packages Related to ncbi-entrez-direct

• dep: curl

  strumento a riga di comando per trasferire dati con una sintassi URL

  or wget

  scarica file dal web

• dep: libc6 (>= 2.3.2)

  Libreria C GNU: librerie condivise
  also a virtual package provided by libc6-udeb

• dep: libwww-perl

  interfaccia semplice e coerente al world-wide web

• dep: libxml-simple-perl

  modulo Perl per leggere e scrivere XML

• dep: perl

  "Practical Extraction and Report Language" di Larry Wall

• sug: curl

  strumento a riga di comando per trasferire dati con una sintassi URL

• sug: libxml2-utils

  utilità XML

• sug: python3

  linguaggio interattivo di alto livello orientato agli oggetti (versione python3 predefinita)

Download ncbi-entrez-direct

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
mips64el	14.6.20210224+dfsg-4+b1	1,735.4 kB	10,887.0 kB	[list of files]