[ Source: spoa ]
Package: spoa (4.0.8-1)
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- Homepage [github.com]
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SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).
Other Packages Related to spoa
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- dep: libc6 (>= 2.34)
- Libreria C GNU: librerie condivise
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- libreria di supporto a GCC
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- dep: libspoa7.0.0 (>= 4.0.8)
- SIMD partial order alignment library
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- dep: libstdc++6 (>= 11)
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- dep: zlib1g (>= 1:1.1.4)
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Download spoa
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| mips64el | 34.8 kB | 100.0 kB | [list of files] |