[ Source: poretools ]
Package: poretools (0.6.0+dfsg-7)
Links for poretools
Debian Resources:
Download Source Package poretools:
- [poretools_0.6.0+dfsg-7.dsc]
- [poretools_0.6.0+dfsg.orig.tar.gz]
- [poretools_0.6.0+dfsg-7.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [poretools.readthedocs.org]
Similar packages:
toolkit for nanopore nucleotide sequencing data
poretools is a flexible toolkit for exploring datasets generated by nanopore sequencing devices from MinION for the purposes of quality control and downstream analysis. Poretools operates directly on the native FAST5 (a variant of the HDF5 standard) file format produced by ONT and provides a wealth of format conversion utilities and data exploration and visualization tools.
Other Packages Related to poretools
|
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-h5py (>= 2.2.0)
- general-purpose Python interface to hdf5
-
- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab
-
- dep: python3-pandas
- data structures for "relational" or "labeled" data
-
- dep: python3-seaborn
- statistical visualization library for Python3
Download poretools
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 19.3 kB | 116.0 kB | [list of files] |