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Source Package: pairtools (1.1.2-1)

Links for pairtools

The following binary packages are built from this source package:

python3-pairtools: Framework to process sequencing data from a Hi-C experiment
python3-pairtools-examples: Process sequencing data from a Hi-C experiment (examples)

adep: debhelper-compat (= 13)

Package not available
adep: dh-sequence-python3

virtual package provided by dh-python
adep: python3-all-dev

package depending on all supported Python 3 development packages
adep: pybuild-plugin-pyproject

Debian helper tools for packaging Python libraries using PEP517
adep: cython3

C-Extensions for Python 3
adep: python-is-python3

symlinks /usr/bin/python to python3
adep: python3-setuptools

Python3 Distutils Enhancements
adep: python3-bioframe

library to enable flexible, scalable operations on genomic interval dataframes
adep: python3-click

Command-Line Interface Creation Kit - Python 3.x
adep: python3-exceptiongroup

Backport of PEP 654 (exception groups)
adep: python3-numpy

Fast array facility to the Python language (Python 3)
adep: python3-pandas

data structures for "relational" or "labeled" data
adep: python3-pysam (>= 0.20.0+ds-3~)

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
adep: python3-pytest

Simple, powerful testing in Python3
adep: python3-standard-pipes

pipes Standard Python Lib (Python 3)
adep: python3-scipy

scientific tools for Python 3
adep: libhts-dev

development files for the HTSlib
adep: python3-yaml

YAML parser and emitter for Python3

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/pairtools.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/pairtools