Package: r-bioc-shortread (1.56.1-1) [debports]
Links for r-bioc-shortread
Debian Resources:
Download Source Package :
Not foundMaintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
Other Packages Related to r-bioc-shortread
|
|
|
|
-
- dep: libc6 (>= 2.16)
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC támogató programkönyvtár
-
- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
-
- dep: r-api-4.0
- virtual package provided by r-base-core
-
- dep: r-api-bioc-3.16
- Package not available
-
- dep: r-base-core (>= 4.2.2.20221110-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.23.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.47.6)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.15.2)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicalignments (>= 1.15.6)
- BioConductor representation and manipulation of short genomic alignments
-
- dep: r-bioc-genomicranges (>= 1.31.8)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.13.12)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rhtslib
- HTSlib high-throughput sequencing library as GNU R package
-
- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.17.25)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-xvector
- BioConductor representation and manpulation of external sequences
-
- dep: r-bioc-zlibbioc
- (Virtual) zlibbioc Bioconductor package
-
- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
-
- dep: r-cran-lattice
- GNU R package for 'Trellis' graphics
-
- dep: r-cran-latticeextra
- GNU R package of additional graphical displays based on lattice
-
- dep: zlib1g (>= 1:1.1.4)
- tömörítő könyvtár - futásidejű
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-cran-runit
- GNU R package providing unit testing framework
Download r-bioc-shortread
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
x32 (unofficial port) | 5,043.0 kB | 7,479.0 kB | [list of files] |