Package: r-bioc-pwalign (1.0.0-2) [debports]

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Perform pairwise sequence alignments

The two main functions in the package are pairwiseAlignment() and stringDist(). The former solves (Needleman-Wunsch) global alignment, (Smith-Waterman) local alignment, and (ends-free) overlap alignment problems. The latter computes the Levenshtein edit distance or pairwise alignment score matrix for a set of strings.

Other Packages Related to r-bioc-pwalign

• dep: libc6 (>= 2.4)

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  also a virtual package provided by libc6-udeb

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-api-bioc-3.19

  virtual package provided by r-bioc-biocgenerics

• dep: r-bioc-biocgenerics (>= 0.50.0)

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• dep: r-bioc-biostrings (>= 2.72.1)

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• dep: r-bioc-iranges (>= 2.38.1)

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• dep: r-bioc-s4vectors (>= 0.42.1)

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• dep: r-bioc-xvector (>= 0.44.0)

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• sug: r-cran-runit

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Download r-bioc-pwalign

Download for all available architectures

Architecture	Package Size	Installed Size	Files
sparc64 (unofficial port)	732.3 kB	2,039.0 kB	[list of files]