[ Source: pdb2pqr ]
Package: pdb2pqr (3.6.1+dfsg-1)
Links for pdb2pqr
Debian Resources:
Download Source Package pdb2pqr:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Steffen Moeller (QA Page)
- Manuel Prinz (QA Page)
- Andreas Tille (QA Page)
External Resources:
- Homepage [www.poissonboltzmann.org]
Similar packages:
Preparation of protein structures for electrostatics calculations
PDB2PQR is a Python software package that automates many of the common tasks of preparing structures for continuum electrostatics calculations. It thus provides a platform-independent utility for converting protein files in PDB format to PQR format. These tasks include:
* Adding a limited number of missing heavy atoms to biomolecular structures * Determining side-chain pKas * Placing missing hydrogens * Optimizing the protein for favorable hydrogen bonding * Assigning charge and radius parameters from a variety of force fields
Other Packages Related to pdb2pqr
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
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- dep: python3-pdb2pqr
- Preparation of protein structures for electrostatics calculations
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- sug: apbs
- Adaptive Poisson Boltzmann Solver
Download pdb2pqr
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 11.2 kB | 31.0 kB | [list of files] |