Package: libmems-dev (1.6.0+4725-11 and others) [debports]

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development library to support DNA string matching and comparative genomics

libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements.

This is the development package containing the statically linked library and the header files.

Other Packages Related to libmems-dev

• dep: libboost-filesystem1.83-dev

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.83-dev

  Boost.Iostreams Library development files

• dep: libgenome-dev

  toolkit for developing bioinformatic related software (devel)

• dep: libmems1t64 (= 1.6.0+4725-11+b1)

  library to support DNA string matching and comparative genomics

• dep: libmuscle-dev

  multiple alignment development library for protein sequences

Download libmems-dev

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
ppc64 (unofficial port)	1.6.0+4725-11+b1	1,017.4 kB	7,247.0 kB	[list of files]