Package: cassiopee (1.0.9-4 and others) [debports]

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index and search tool in genomic sequences

Cassiopee index and search library C implementation. It is a complete rewrite of the ruby Cassiopee gem. It scans an input genomic sequence (dna/rna/protein) and search for a subsequence with exact match or allowing substitutions (Hamming distance) and/or insertion/deletions.

This package contains the cassiopee and cassiopeeknife tools.

Other Packages Related to cassiopee

• dep: libc6.1 (>= 2.37)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6.1-udeb

• dep: libcassie1v5 (>= 1.0.9)

  library implementating search algorithms

• dep: libgoogle-glog0v6t64 (>= 0.6.0)

  library that implements application-level logging.

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8

  library to determine the call-chain of a program - runtime

Download cassiopee

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
ia64 (unofficial port)	1.0.9-4+b1	19.0 kB	76.0 kB	[list of files]