Package: libssw1 (1.2.5-1) [debports]

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Experimental package

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

Other Packages Related to libssw1

• dep: libc6 (>= 2.16)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC támogató programkönyvtár

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: zlib1g

  tömörítő könyvtár - futásidejű

Download libssw1

Download for all available architectures

Architecture	Package Size	Installed Size	Files
x32 (unofficial port)	20.8 kB	56.0 kB	[list of files]