Package: r-bioc-bsgenome (1.74.0-1)

[ Source: r-bioc-bsgenome  ]

Experimental package

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

BioConductor infrastructure for Biostrings-based genome data packages

This BioConductor module provides some basic infrastructure for Biostrings-based genome data packages.

Other Packages Related to r-bioc-bsgenome

• dep: r-api-4.0

  Package not available

• dep: r-api-bioc-3.20

  virtual package provided by r-bioc-biocgenerics

• dep: r-bioc-biocgenerics (>= 0.13.8)

  generic functions for Bioconductor

• dep: r-bioc-biocio

  standard input and output for Bioconductor packages

• dep: r-bioc-biostrings (>= 2.47.6)

  GNU R string objects representing biological sequences

• dep: r-bioc-genomeinfodb (>= 1.25.6)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicranges (>= 1.31.10)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.13.16)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rsamtools

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.17.28)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-xvector

  BioConductor representation and manpulation of external sequences

• dep: r-cran-matrixstats

  GNU R methods that apply to rows and columns of a matrix

• sug: r-cran-biocmanager

  access the Bioconductor project package repository

• sug: r-cran-runit

  GNU R package providing unit testing framework

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