Package: fastqtl (2.184+dfsg-6 and others)

[ Source: fastqtl  ]

Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes

The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.

Tags: Field: Biology, Bioinformatics, User Interface: interface::commandline, role::program, Purpose: Analysing

Other Packages Related to fastqtl

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis2-openmp, libblis2-pthread, libblis2-serial, libopenblas-base

• dep: libboost-iostreams1.67.0

  Boost.Iostreams Library

• dep: libboost-program-options1.67.0

  program options library for C++

• dep: libc6 (>= 2.25)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc1 (>= 1:3.0) [not armhf]

  GCC támogató programkönyvtár

  dep: libgcc1 (>= 1:3.5) [armhf]

• dep: libgsl23 (>= 2.5)

  GNU Scientific Library (GSL) -- library package

• dep: libhts2 (>= 1.0)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: r-mathlib

  GNU R standalone mathematics library

• dep: zlib1g (>= 1:1.1.4)

  tömörítő könyvtár - futásidejű

• sug: fastqtl-doc

  QTL mapper in cis for molecular phenotypes - documentation

Download fastqtl

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	2.184+dfsg-6+b1	191.2 kB	657.0 kB	[list of files]
arm64	2.184+dfsg-6+b1	169.4 kB	609.0 kB	[list of files]
armhf	2.184+dfsg-6+b1	157.4 kB	424.0 kB	[list of files]