Package: phybin (0.3-3)

[ Source: phybin  ]

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

Other Packages Related to phybin

• dep: libatomic1 (>= 4.8)

  support library providing __atomic built-in functions

• dep: libc6 (>= 2.27)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libffi6 (>= 3.2)

  Foreign Function Interface library runtime

• dep: libgmp10

  Multiprecision arithmetic library

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Architecture	Package Size	Installed Size	Files
arm64	1,939.1 kB	14,511.0 kB	[list of files]