Package: cassiopee (1.0.9-2)

[ Source: cassiopee  ]

index and search tool in genomic sequences

Cassiopee index and search library C implementation. It is a complete rewrite of the ruby Cassiopee gem. It scans an input genomic sequence (dna/rna/protein) and search for a subsequence with exact match or allowing substitutions (Hamming distance) and/or insertion/deletions.

This package contains the cassiopee and cassiopeeknife tools.

Other Packages Related to cassiopee

• dep: libboost-iostreams1.67.0

  Boost.Iostreams Library

• dep: libboost-regex1.67.0 (>= 1.67.0-10)

  regular expression library for C++

• dep: libboost-serialization1.67.0

  serialization library for C++

• dep: libc6 (>= 2.14)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libcassie1v5

  library implementating search algorithms

• dep: libgcc1 (>= 1:3.0)

  GCC támogató programkönyvtár

• dep: libgomp1 (>= 4.2.1)

  GCC OpenMP (GOMP) support library

• dep: libgoogle-glog0v5

  library that implements application-level logging.

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

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amd64	17.5 kB	75.0 kB	[list of files]