Package: ggd-utils (0.0.7+ds-3 and others)

[ Source: ggd-utils  ]

programs for use in ggd

Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:

    * a .tbi is present
    * the VCF has ""##fileformat=VCF" as the first
    line
    * the VCF has a #CHROM header
    * the chromosome are in the order specified by
    the genome file (and present)
    * the positions are sorted
    * the positions are <= the chromosome lengths
    defined in the genome file.

As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes

Other Packages Related to ggd-utils

• dep: libc6 (>= 2.4)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

Download ggd-utils

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
s390x	0.0.7+ds-3+b6	1,545.2 kB	5,183.0 kB	[list of files]