Package: beast2-mcmc (2.6.3+dfsg-2)

[ Source: beast2-mcmc  ]

Bayesian MCMC phylogenetic inference

BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability. Included is a simple to use user-interface program for setting up standard analyses and a suit of programs for analysing the results.

This is no new upstream version of beast-mcmc (1.x) but rather a rewritten version.

Other Packages Related to beast2-mcmc

• dep: default-jre

  Standard Java or Java compatible Runtime

  or java9-runtime

  virtual package provided by default-jre, openjdk-11-jre, openjdk-17-jre

• dep: libantlr4-runtime-java

  Runtime library for ANTLR 4

• dep: libcolt-free-java

  scalable scientific and technical computing in Java

• dep: libhmsbeagle-java

  High-performance lib for Bayesian and Maximum Likelihood phylogenetics (java)

• dep: libjam-java

  Java applications look and behave like native applications

• sug: beast2-mcmc-doc

  Bayesian MCMC phylogenetic inference - documentation

Download beast2-mcmc

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	2,224.0 kB	2,749.0 kB	[list of files]