Package: spoa (4.0.7+ds-1 and others)

[ Source: spoa  ]

SIMD partial order alignment tool

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

Other Packages Related to spoa

• dep: libc6 (>= 2.4)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC támogató programkönyvtár

• dep: libspoa7.0.0 (>= 4.0.7+ds)

  SIMD partial order alignment library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.1.4)

  tömörítő könyvtár - futásidejű

Download spoa

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
mips64el	4.0.7+ds-1+b1	36.7 kB	85.0 kB	[list of files]