Package: python3-dipy (1.3.0-3)

[ Source: dipy  ]

Python library for the analysis of diffusion MRI datasets

DIPY is a software project for computational neuroanatomy. It focuses on diffusion magnetic resonance imaging (dMRI) analysis and tractography but also contains implementations of other computational imaging methods such as denoising and registration that are applicable to the greater medical imaging and image processing communities. Additionally, DIPY is an international project which brings together scientists across labs and countries to share their state-of-the-art code and expertise in the same codebase, accelerating scientific research in medical imaging.

Here are some of the highlights:

 - Reconstruction algorithms: CSD, DSI, GQI, DTI, DKI, QBI, SHORE
   and MAPMRI
 - Fiber tracking algorithms: deterministic and probabilistic
 - Native linear and nonlinear registration of images
 - Fast operations on streamlines (selection, resampling, registration)
 - Tractography segmentation and clustering
 - Many image operations, e.g., reslicing or denoising with NLMEANS
 - Estimation of distances/correspondences between streamlines and
   connectivity matrices
 - Interactive visualization of streamlines in the space of images

This package contains the Python 3 version.

Other Packages Related to python3-dipy

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-dipy-lib (>= 1.3.0-3)

  Python library for the analysis of diffusion MRI datasets -- Python3 extensions

• dep: python3-h5py

  general-purpose Python interface to hdf5

• dep: python3-h5py-serial

  general-purpose Python interface to hdf5 (Python 3 serial)

• dep: python3-nibabel (>= 3.0.0)

  Python3 bindings to various neuroimaging data formats

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-packaging

  core utilities for python3 packages

• dep: python3-pandas

  data structures for "relational" or "labeled" data

• dep: python3-scipy

  scientific tools for Python 3

• dep: python3-tqdm

  fast, extensible progress bar for Python 3 and CLI tool

• rec: python3-matplotlib

  Python based plotting system in a style similar to Matlab (Python 3)

• rec: python3-nose

  test discovery and running for Python3 unittest

• rec: python3-sklearn

  Python modules for machine learning and data mining - Python 3

• rec: python3-tables

  hierarchical database for Python3 based on HDF5

• rec: python3-vtk7

  Python bindings for VTK

• sug: python-dipy-doc

  Python library for the analysis of diffusion MRI datasets -- documentation

Download python3-dipy

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	3,046.8 kB	9,186.0 kB	[list of files]