Package: pbhoney (15.8.24+dfsg-7)

[ Source: pbsuite  ]

genomic structural variation discovery

PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.

PBHoney is part of the PBSuite.

Other Packages Related to pbhoney

• dep: blasr

  mapping single-molecule sequencing reads

• dep: python3

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• dep: python3-h5py

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• dep: python3-intervaltree-bio

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• dep: python3-networkx

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• dep: python3-numpy

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• dep: python3-pbbanana (= 15.8.24+dfsg-7)

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• dep: python3-pbsuite-utils (= 15.8.24+dfsg-7)

  software for Pacific Biosciences sequencing data -- Python utilities

• dep: python3-pysam

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• dep: samtools

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• rec: pbdagcon

  sequence consensus using directed acyclic graphs

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Architecture	Package Size	Installed Size	Files
all	1,031.7 kB	3,809.0 kB	[list of files]