Paquet : maqview (0.2.5-12)

[ Paquet source : maqview  ]

graphical read alignment viewer for short gene sequences

Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region.

In comparison to tgap-maq, the text-based read alignment viewer written by James Bonfield, Maqview is faster and takes up much less memory and disk space in indexing. This is possibly because tgap aims to be a general-purpose viewer but Maqview fully makes use of the fact that a Maq alignment file has already been sorted. Maqview is also efficient in viewing and provides a command-line tool to quickly retrieve any region in an Maq alignment file.

Autres paquets associés à maqview

• dep: libc6 (>= 2.34)

  bibliothèque C GNU : bibliothèques partagées
  un paquet virtuel est également fourni par libc6-udeb

• dep: libgcc-s1 (>= 3.5)

  bibliothèque de prise en charge de GCC

• dep: libgl1

  bibliothèque de transport GL indépendante du fournisseur – prise en charge de l’ancienne GL

• dep: libglu1-mesa

  bibliothèque utilitaire Mesa OpenGL (GLU)

  ou libglu1

  paquet virtuel fourni par libglu1-mesa

• dep: libglut3.12 (>= 3.4.0)

  boîte à outils d'utilitaires OpenGL

• dep: libstdc++6 (>= 5)

  bibliothèque standard C++ de GNU v3

Télécharger maqview

Télécharger pour toutes les architectures proposées

Architecture	Taille du paquet	Espace occupé une fois installé	Fichiers
armel	98,9 ko	772,0 ko	[liste des fichiers]