Paquet : norsnet (1.0.17-4)

[ Paquet source : norsnet  ]

tool to identify unstructured loops in proteins

NORSnet can distinguish between very long contiguous segments with non-regular secondary structure (NORS regions) and well-folded proteins.

NORSnet was trained on predicted information rather than on experimental data. This allows NORSnet to reach into regions in sequence space that are not covered by specialized disorder predictors. One disadvantage of this approach is that it is not optimal for the identification of the "average" disordered region.

NORSnet takes the following input, further described on norsnet(1):

 * a protein sequence in a FASTA file
 * secondary structure and solvent accessibility prediction by prof(1)
 * an HSSP file
 * flexible/rigid residues prediction by profbval(1)

Autres paquets associés à norsnet

• dep: profnet-norsnet

  neural network architecture for norsnet

• rec: blast2

  paquet factice de transition vers ncbi-blast+-legacy

• rec: librg-utils-perl

  analyseurs syntaxiques et les utilitaires de conversion de format, utilisés par profphd

• rec: profbval

  prédicteur des résidus de protéine flexibles/rigides à partir d'une séquence

• rec: profphd

  secondary structure and solvent accessibility predictor

• sug: pp-popularity-contest

  PredictProtein popularity contest

Télécharger norsnet

Télécharger pour toutes les architectures proposées

Architecture	Taille du paquet	Espace occupé une fois installé	Fichiers
all	43,6 ko	208,0 ko	[liste des fichiers]