[ Paquet source : cat-bat ]
Paquet : cat-bat (5.2.3-2)
Liens pour cat-bat
Ressources Debian :
- Rapports de bogues
- Developer Information
- Journal des modifications Debian
- Fichier de licence
- Suivis des correctifs pour Debian
Télécharger le paquet source cat-bat :
Responsables :
- Debian Med Packaging Team (Page QA, Archive du courrier électronique)
- Andreas Tille (Page QA)
- Nilesh Patra (Page QA)
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines for the taxonomic classification of long DNA sequences and metagenome assembled genomes (MAGs/bins) of both known and (highly) unknown microorganisms, as generated by contemporary metagenomics studies. The core algorithm of both programs involves gene calling, mapping of predicted ORFs against the nr protein database, and voting-based classification of the entire contig / MAG based on classification of the individual ORFs. CAT and BAT can be run from intermediate steps if files are formatted appropriately.
Autres paquets associés à cat-bat
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- dep: diamond-aligner
- aligneur de séquence locale accéléré compatible avec BLAST
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- dep: prodigal
- Microbial (bacterial and archaeal) gene finding program
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
Télécharger cat-bat
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| arm64 | 28,9 ko | 180,0 ko | [liste des fichiers] |