Paketti: travis (220729-1 ja muut)

[ Source: travis  ]

trajectory analyzer and visualizer

TRAVIS (Trajectory Analyzer and Visualizer) is a free tool for analyzing and visualizing trajectories from all kinds of Molecular Dynamics or Monte Carlo simulations. The aim of TRAVIS is to collect as many analyses as possible in one program, creating a powerful tool and making it unnecessary to use many different programs for evaluating simulations. This should greatly rationalize and simplify the workflow of analyzing trajectories. The following analysis functions are available:

Static (time independent) Functions:

 * Radial, Angular, Dihedreal or Combined Distribution Function
 * Point-Plane or Point-Line Distance Distribution
 * Plane Projection Distribution
 * Fixed Plane Density Profile
 * Density, Spatial or Dipole Distribution Function

Dynamic (time dependent) Functions:

 * Velocity Distribution Function
 * Mean Square Displacement / Diffusion Coefficients
 * Velocity Autocorrelation Functions
 * Vector Reorientation Dynamics
 * Van Hove Correlation Function
 * Aggregation Functions (DACF, DLDF, DDisp)

Spectroscopic Functions:

 * Calculate Power Spectrum
 * Calculate IR Spectrum
 * Calculate Raman Spectrum

TRAVIS can read trajectory files in XYZ, PDB, LAMMPS or DLPOLY format.

Muut pakettiin travis liittyvät paketit

• dep: libc6 (>= 2.34) [ei arm64]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.38) [arm64]

• dep: libgcc-s1 (>= 3.0) [amd64, i386, s390x]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [arm64, mips64el, riscv64]

• dep: libstdc++6 (>= 11) [ei arm64, riscv64]

  GNU standardi C++ -kirjasto, versio 3

  dep: libstdc++6 (>= 13.1) [arm64, riscv64]

• sug: cp2k

  Paketti ei saatavilla

• sug: gnuplot

  Command-line driven interactive plotting program.
  myös näennäispaketti, jonka toteuttaa gnuplot-nox, gnuplot-qt, gnuplot-x11

• sug: grace

  XY graphing and plotting tool

• sug: graphviz

  rich set of graph drawing tools

• sug: pymol

  Molecular Graphics System

Imuroi travis

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	220729-1	1,637.5 kt	4,686.0 kt	[tiedostoluettelo]
arm64	220729-1+b1	1,442.7 kt	4,527.0 kt	[tiedostoluettelo]
armel	220729-1	1,489.3 kt	4,781.0 kt	[tiedostoluettelo]
armhf	220729-1	1,434.2 kt	3,373.0 kt	[tiedostoluettelo]
i386	220729-1	1,670.8 kt	5,085.0 kt	[tiedostoluettelo]
mips64el	220729-1	1,411.2 kt	5,514.0 kt	[tiedostoluettelo]
ppc64el	220729-1	1,560.9 kt	5,294.0 kt	[tiedostoluettelo]
riscv64	220729-1+b1	1,587.5 kt	3,859.0 kt	[tiedostoluettelo]
s390x	220729-1	1,414.8 kt	4,638.0 kt	[tiedostoluettelo]