Paketti: python3-unifrac (1.3-4)

[ Source: unifrac  ]

high-performance phylogenetic diversity calculations

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains the Python3 module.

Muut pakettiin python3-unifrac liittyvät paketit

• dep: libc6 (>= 2.14) [amd64]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.4) [mips64el]

• dep: libssu0 (>= 1.4)

  high-performance phylogenetic diversity calculations (lib)

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.13)

  dep: python3 (>= 3.12~)

• dep: python3-biom-format

  Biological Observation Matrix (BIOM) format (Python 3)

• dep: python3-h5py (>= 3.3.0)

  general-purpose Python interface to hdf5

• dep: python3-iow

  balanced parentheses tree structure

• dep: python3-numpy (>= 1:1.25.0)

  Fast array facility to the Python language (Python 3)

• dep: python3-numpy-abi9

  näennäispaketti, jonka toteuttaa python3-numpy

• dep: python3-skbio (>= 0.6.1)

  Python3 data structures, algorithms, educational resources for bioinformatic

Imuroi python3-unifrac

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	146.6 kt	721.0 kt	[tiedostoluettelo]
arm64	129.8 kt	684.0 kt	[tiedostoluettelo]
mips64el	127.0 kt	756.0 kt	[tiedostoluettelo]
ppc64el	143.6 kt	748.0 kt	[tiedostoluettelo]
riscv64	142.9 kt	644.0 kt	[tiedostoluettelo]