Paketti: pbbamtools (2.4.0+dfsg-1 ja muut)

[ Source: pbbam  ]

processing Pacific Biosciences binary alignment/map files

The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.

PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.

This package provides command-line utilities for working with PacBio BAM files.

Muut pakettiin pbbamtools liittyvät paketit

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC:n apukirjasto

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: libpbbam2.4.0 (= 2.4.0+dfsg-1+b4)

  Pacific Biosciences binary alignment/map (BAM) library

• dep: libpbcopper2.3.0 (>= 2.3.0+dfsg)

  data structures, algorithms, and utilities for C++ applications

• dep: libstdc++6 (>= 13.1)

  GNU standardi C++ -kirjasto, versio 3

• rec: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

Imuroi pbbamtools

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	2.4.0+dfsg-1+b4	133.8 kt	479.0 kt	[tiedostoluettelo]