Source Package: r-bioc-purecn (2.10.0+dfsg-1)
Links for r-bioc-purecn
Debian-palvelut:
Ylläpitäjät:
External Resources:
Seuraavat binääripaketit on käännetty tästä lähdepaketista:
- r-bioc-purecn
- copy number calling and SNV classification using targeted short read sequencing
Muut pakettiin r-bioc-purecn liittyvät paketit
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- adep:
debhelper-compat
(= 13)
- Paketti ei saatavilla
-
- adep:
dh-r
- Debian helper tools for packaging R libraries
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- adep:
r-base-dev
- GNU R installation of auxiliary GNU R packages
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- adep:
r-bioc-dnacopy
(>= 1.78.0)
- R package: DNA copy number data analysis
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- adep:
r-bioc-variantannotation
(>= 1.50.0)
- BioConductor annotation of genetic variants
-
- adep:
r-bioc-genomicranges
(>= 1.56.1)
- BioConductor representation and manipulation of genomic intervals
-
- adep:
r-bioc-iranges
(>= 2.38.1)
- GNU R low-level containers for storing sets of integer ranges
-
- adep:
r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
-
- adep:
r-bioc-s4vectors
(>= 0.42.1)
- BioConductor S4 implementation of vectors and lists
-
- adep:
r-cran-data.table
- GNU R extension of Data.frame
-
- adep:
r-bioc-summarizedexperiment
(>= 1.34.0)
- BioConductor assay container
-
- adep:
r-bioc-genomeinfodb
(>= 1.40.1)
- BioConductor utilities for manipulating chromosome identifiers
-
- adep:
r-bioc-genomicfeatures
(>= 1.56.0)
- GNU R tools for making and manipulating transcript centric annotations
-
- adep:
r-bioc-rsamtools
(>= 2.20.0)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- adep:
r-bioc-biobase
(>= 2.64.0)
- base functions for Bioconductor
-
- adep:
r-bioc-biostrings
(>= 2.72.1)
- GNU R string objects representing biological sequences
-
- adep:
r-bioc-biocgenerics
(>= 0.50.0)
- generic functions for Bioconductor
-
- adep:
r-bioc-rtracklayer
(>= 1.64.0)
- GNU R interface to genome browsers and their annotation tracks
-
- adep:
r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- adep:
r-cran-gridextra
- GNU R package with extensions for the grid package
-
- adep:
r-cran-futile.logger
- logging utility for GNU R
-
- adep:
r-cran-vgam
- GNU R package for estimating vector generalized additive models
-
- adep:
r-cran-mclust
- Gaussian Mixture Modelling for Model-Based Clustering
-
- adep:
r-bioc-rhdf5
(>= 2.48.0)
- BioConductor HDF5 interface to R
-
- adep:
r-cran-matrix
- GNU R package of classes for dense and sparse matrices
