Paketti: libjellyfish-2.0-dev (2.3.1-3 ja muut)

[ Source: jellyfish  ]

count k-mers in DNA sequences (development files of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the development files (static library and header files)

Tagit: Software Development: Kirjastot, Role: Development Library

Muut pakettiin libjellyfish-2.0-dev liittyvät paketit

• dep: libjellyfish-2.0-2 (= 2.3.0-12) [ia64]

  count k-mers in DNA sequences (dynamic library of jellyfish)

  dep: libjellyfish-2.0-2 (= 2.3.1-2+b1) [hppa]

  dep: libjellyfish-2.0-2 (= 2.3.1-3+b6) [ei hppa, ia64]

Imuroi libjellyfish-2.0-dev

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	2.3.1-3+b6	135.1 kt	691.0 kt	[tiedostoluettelo]
arm64	2.3.1-3+b6	132.9 kt	688.0 kt	[tiedostoluettelo]
hppa (epävirallinen siirros)	2.3.1-2+b1	134.3 kt	627.0 kt	[tiedostoluettelo]
ia64 (epävirallinen siirros)	2.3.0-12	150.5 kt	825.0 kt	[tiedostoluettelo]
mips64el	2.3.1-3+b6	139.9 kt	767.0 kt	[tiedostoluettelo]
ppc64el	2.3.1-3+b6	140.2 kt	718.0 kt	[tiedostoluettelo]
riscv64	2.3.1-3+b6	268.8 kt	2,294.0 kt	[tiedostoluettelo]