Paketti: kalign (1:3.4.0-1 ja muut)

[ Source: kalign  ]

Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tagit: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Muut pakettiin kalign liittyvät paketit

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• enh: bioperl-run

  BioPerl wrappers: scripts

• enh: t-coffee

  Multiple Sequence Alignment

Imuroi kalign

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
armel	1:3.4.0-1+b1	79.9 kt	305.0 kt	[tiedostoluettelo]