Paketti: r-bioc-variantannotation (1.52.0-1)

[ Source: r-bioc-variantannotation  ]

Kokeellinen paketti

Varoitus: Tämä paketti on kokeellisesta jakelusta. Tämä tarkoittaa, että se on luultavasti epävakaa tai buginen, ja voi aiheuttaa jopa tiedonhäviötä. Kannattaa ehdottomasti tutustua muutoslokiin ja muihin mahdollisiin ohjeisiin ennen käyttöönottoa.

BioConductor annotation of genetic variants

This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.

Muut pakettiin r-bioc-variantannotation liittyvät paketit

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libcurl4t64 (>= 7.18.0)

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: liblzma5 (>= 5.1.1alpha+20120614)

  XZ-tiedostomuodon pakkauskirjasto

• dep: r-api-4.0

  Paketti ei saatavilla

• dep: r-api-bioc-3.20

  näennäispaketti, jonka toteuttaa r-bioc-biocgenerics

• dep: r-bioc-annotationdbi (>= 1.27.9)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.37.0)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.57.2)

  GNU R string objects representing biological sequences

• dep: r-bioc-bsgenome (>= 1.47.3)

  BioConductor infrastructure for Biostrings-based genome data packages

• dep: r-bioc-genomeinfodb (>= 1.15.2)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicfeatures (>= 1.31.3)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.41.5)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.23.9)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-rhtslib (>= 2.99.0)

  HTSlib high-throughput sequencing library as GNU R package

• dep: r-bioc-rsamtools (>= 2.19.1)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.39.7)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.27.12)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.19.5)

  BioConductor assay container

• dep: r-bioc-xvector (>= 0.29.2)

  BioConductor representation and manpulation of external sequences

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi

  GNU R package providing a generic database interface

• dep: zlib1g (>= 1:1.2.3.3)

  pakkauskirjaston ajonaikaistiedostot

• sug: r-bioc-annotationhub

  GNU R client to access AnnotationHub resources

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-snpstats

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• sug: r-cran-ggplot2

  implementation of the Grammar of Graphics

• sug: r-cran-httr

  GNU R tools for working with URLs and HTTP

• sug: r-cran-jsonlite

  Robust, High Performance JSON Parser and Generator for R

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-magick

  advanced graphics and image-processing in GNU R

• sug: r-cran-runit

  GNU R package providing unit testing framework

Imuroi r-bioc-variantannotation

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
riscv64	3,477.0 kt	6,656.0 kt	[tiedostoluettelo]